Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Gm13036-201ENSMUST00000117799 748 ntBASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Gm12350-201ENSMUST00000121208 462 ntBASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Gm18489-201ENSMUST00000172565 551 ntBASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Gm45167-201ENSMUST00000208007 322 ntBASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Gm15590-201ENSMUST00000078419 552 ntBASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nhlrc4Q3UP44 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Gm11764-201ENSMUST00000120221 623 ntBASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Mir5126-201ENSMUST00000175513 77 ntBASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Gm2651-201ENSMUST00000203560 838 ntBASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nhlrc4Q3UP44 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Gm4899-201ENSMUST00000178708 719 ntBASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Nhlrc4Q3UP44 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nhlrc4Q3UP44 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nhlrc4Q3UP44 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.16□□□□□ -0.14
Nhlrc4Q3UP44 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nhlrc4Q3UP44 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nhlrc4Q3UP44 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms