Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ptchd3Q0EEE2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ptchd3Q0EEE2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Gm9013-201ENSMUST00000132939 882 ntBASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Gm6623-201ENSMUST00000173570 544 ntBASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Gm23634-201ENSMUST00000175071 91 ntBASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ptchd3Q0EEE2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ptchd3Q0EEE2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ptchd3Q0EEE2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ptchd3Q0EEE2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Gm5587-201ENSMUST00000206270 674 ntBASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ptchd3Q0EEE2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms