Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tff1Q08423 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Tff1Q08423 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Tff1Q08423 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Tff1Q08423 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Tff1Q08423 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.87□□□□□ -0.35
Tff1Q08423 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Tff1Q08423 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.87□□□□□ -0.35
Tff1Q08423 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Tff1Q08423 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.87□□□□□ -0.35
Tff1Q08423 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Tff1Q08423 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tff1Q08423 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tff1Q08423 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tff1Q08423 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tff1Q08423 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tff1Q08423 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Tff1Q08423 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.86□□□□□ -0.35
Tff1Q08423 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.86□□□□□ -0.35
Tff1Q08423 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tff1Q08423 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tff1Q08423 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.86□□□□□ -0.35
Tff1Q08423 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tff1Q08423 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.86□□□□□ -0.35
Tff1Q08423 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.86□□□□□ -0.35
Tff1Q08423 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.86□□□□□ -0.35
Tff1Q08423 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.86□□□□□ -0.35
Tff1Q08423 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.86□□□□□ -0.35
Tff1Q08423 Birc2-201ENSMUST00000054878 378 ntBASIC12.86□□□□□ -0.35
Tff1Q08423 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tff1Q08423 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tff1Q08423 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Tff1Q08423 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.86□□□□□ -0.35
Tff1Q08423 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tff1Q08423 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tff1Q08423 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tff1Q08423 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tff1Q08423 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tff1Q08423 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tff1Q08423 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tff1Q08423 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.85□□□□□ -0.35
Tff1Q08423 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tff1Q08423 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Tff1Q08423 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Tff1Q08423 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Gm13884-201ENSMUST00000118103 829 ntBASIC12.85□□□□□ -0.35
Tff1Q08423 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tff1Q08423 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.85□□□□□ -0.35
Tff1Q08423 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.85□□□□□ -0.35
Tff1Q08423 Gm43347-201ENSMUST00000200226 580 ntBASIC12.85□□□□□ -0.35
Tff1Q08423 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tff1Q08423 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.85□□□□□ -0.35
Tff1Q08423 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Tff1Q08423 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tff1Q08423 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tff1Q08423 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.84□□□□□ -0.35
Tff1Q08423 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms