Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx3-2P97503 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Gm15358-201ENSMUST00000119249 520 ntBASIC14.59□□□□□ -0.07
Nkx3-2P97503 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.59□□□□□ -0.07
Nkx3-2P97503 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Gm27628-201ENSMUST00000184911 107 ntBASIC14.59□□□□□ -0.07
Nkx3-2P97503 Gm37935-201ENSMUST00000192012 982 ntBASIC14.59□□□□□ -0.07
Nkx3-2P97503 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx3-2P97503 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx3-2P97503 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx3-2P97503 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx3-2P97503 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx3-2P97503 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx3-2P97503 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx3-2P97503 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx3-2P97503 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Nkx3-2P97503 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx3-2P97503 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Gm11779-201ENSMUST00000118541 368 ntBASIC14.58□□□□□ -0.08
Nkx3-2P97503 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.58□□□□□ -0.08
Nkx3-2P97503 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.58□□□□□ -0.08
Nkx3-2P97503 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx3-2P97503 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx3-2P97503 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Gm15467-201ENSMUST00000120582 445 ntBASIC14.57□□□□□ -0.08
Nkx3-2P97503 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
Nkx3-2P97503 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms