Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc1P97496 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.27■□□□□ 0.68
Smarcc1P97496 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc1P97496 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Smarcc1P97496 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.27■□□□□ 0.68
Smarcc1P97496 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc1P97496 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc1P97496 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc1P97496 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Smarcc1P97496 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc1P97496 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc1P97496 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc1P97496 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcc1P97496 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarcc1P97496 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarcc1P97496 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarcc1P97496 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarcc1P97496 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.27■□□□□ 0.67
Smarcc1P97496 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarcc1P97496 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarcc1P97496 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Smarcc1P97496 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Smarcc1P97496 Gm27306-201ENSMUST00000183970 107 ntBASIC19.26■□□□□ 0.67
Smarcc1P97496 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.26■□□□□ 0.67
Smarcc1P97496 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.26■□□□□ 0.67
Smarcc1P97496 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Smarcc1P97496 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcc1P97496 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.25■□□□□ 0.67
Smarcc1P97496 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Smarcc1P97496 Gm14722-201ENSMUST00000118943 689 ntBASIC19.25■□□□□ 0.67
Smarcc1P97496 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC19.25■□□□□ 0.67
Smarcc1P97496 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.25■□□□□ 0.67
Smarcc1P97496 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC19.25■□□□□ 0.67
Smarcc1P97496 Wdyhv1-203ENSMUST00000226889 394 ntBASIC19.25■□□□□ 0.67
Smarcc1P97496 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Smarcc1P97496 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Smarcc1P97496 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Smarcc1P97496 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarcc1P97496 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc1P97496 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc1P97496 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc1P97496 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.24■□□□□ 0.67
Smarcc1P97496 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc1P97496 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc1P97496 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc1P97496 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc1P97496 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Smarcc1P97496 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc1P97496 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc1P97496 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Smarcc1P97496 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc1P97496 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.24■□□□□ 0.67
Smarcc1P97496 Mir8102-201ENSMUST00000184148 139 ntBASIC19.24■□□□□ 0.67
Smarcc1P97496 Gm27989-201ENSMUST00000184721 107 ntBASIC19.24■□□□□ 0.67
Smarcc1P97496 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC19.24■□□□□ 0.67
Smarcc1P97496 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc1P97496 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc1P97496 Gm2423-201ENSMUST00000074863 733 ntBASIC19.24■□□□□ 0.67
Smarcc1P97496 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Smarcc1P97496 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.24■□□□□ 0.67
Smarcc1P97496 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc1P97496 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc1P97496 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarcc1P97496 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc1P97496 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc1P97496 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarcc1P97496 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms