Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
SgcaP82350 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.98□□□□□ -0.33
SgcaP82350 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SgcaP82350 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SgcaP82350 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.97□□□□□ -0.33
SgcaP82350 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SgcaP82350 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SgcaP82350 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SgcaP82350 Mir1199-201ENSMUST00000117015 119 ntBASIC12.97□□□□□ -0.33
SgcaP82350 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Gm20760-201ENSMUST00000179197 648 ntBASIC12.97□□□□□ -0.33
SgcaP82350 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.97□□□□□ -0.33
SgcaP82350 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.97□□□□□ -0.33
SgcaP82350 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.97□□□□□ -0.33
SgcaP82350 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SgcaP82350 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.97□□□□□ -0.33
SgcaP82350 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SgcaP82350 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcaP82350 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
SgcaP82350 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.96□□□□□ -0.33
SgcaP82350 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcaP82350 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.96□□□□□ -0.34
SgcaP82350 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SgcaP82350 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SgcaP82350 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SgcaP82350 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.96□□□□□ -0.34
SgcaP82350 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
SgcaP82350 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SgcaP82350 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.96□□□□□ -0.34
SgcaP82350 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SgcaP82350 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SgcaP82350 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SgcaP82350 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.96□□□□□ -0.34
SgcaP82350 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SgcaP82350 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SgcaP82350 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SgcaP82350 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SgcaP82350 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.95□□□□□ -0.34
SgcaP82350 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SgcaP82350 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SgcaP82350 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SgcaP82350 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SgcaP82350 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SgcaP82350 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SgcaP82350 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.95□□□□□ -0.34
SgcaP82350 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
SgcaP82350 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SgcaP82350 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms