Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SgcbP82349 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SgcbP82349 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SgcbP82349 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SgcbP82349 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.77□□□□□ -0.21
SgcbP82349 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.77□□□□□ -0.21
SgcbP82349 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.77□□□□□ -0.21
SgcbP82349 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.77□□□□□ -0.21
SgcbP82349 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.77□□□□□ -0.21
SgcbP82349 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.77□□□□□ -0.21
SgcbP82349 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.77□□□□□ -0.21
SgcbP82349 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SgcbP82349 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SgcbP82349 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.76□□□□□ -0.21
SgcbP82349 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.76□□□□□ -0.21
SgcbP82349 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
SgcbP82349 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.76□□□□□ -0.21
SgcbP82349 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Mir5126-201ENSMUST00000175513 77 ntBASIC13.76□□□□□ -0.21
SgcbP82349 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
SgcbP82349 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.76□□□□□ -0.21
SgcbP82349 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
SgcbP82349 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SgcbP82349 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SgcbP82349 Gm15590-201ENSMUST00000078419 552 ntBASIC13.76□□□□□ -0.21
SgcbP82349 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.76□□□□□ -0.21
SgcbP82349 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SgcbP82349 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.75□□□□□ -0.21
SgcbP82349 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SgcbP82349 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SgcbP82349 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SgcbP82349 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.75□□□□□ -0.21
SgcbP82349 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SgcbP82349 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SgcbP82349 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SgcbP82349 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SgcbP82349 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SgcbP82349 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SgcbP82349 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SgcbP82349 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SgcbP82349 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.75□□□□□ -0.21
SgcbP82349 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SgcbP82349 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.75□□□□□ -0.21
SgcbP82349 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SgcbP82349 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.75□□□□□ -0.21
SgcbP82349 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SgcbP82349 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms