Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CiitaP79621 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CiitaP79621 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.72■□□□□ 0.27
CiitaP79621 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CiitaP79621 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CiitaP79621 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CiitaP79621 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.72■□□□□ 0.27
CiitaP79621 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CiitaP79621 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.72■□□□□ 0.27
CiitaP79621 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CiitaP79621 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CiitaP79621 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CiitaP79621 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CiitaP79621 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CiitaP79621 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.71■□□□□ 0.27
CiitaP79621 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CiitaP79621 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.71■□□□□ 0.27
CiitaP79621 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CiitaP79621 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
CiitaP79621 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
CiitaP79621 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CiitaP79621 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.7■□□□□ 0.26
CiitaP79621 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CiitaP79621 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.7■□□□□ 0.26
CiitaP79621 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CiitaP79621 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.7■□□□□ 0.26
CiitaP79621 Gm10499-201ENSMUST00000174094 934 ntBASIC16.7■□□□□ 0.26
CiitaP79621 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CiitaP79621 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CiitaP79621 Gm5177-201ENSMUST00000183092 997 ntBASIC16.7■□□□□ 0.26
CiitaP79621 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.7■□□□□ 0.26
CiitaP79621 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CiitaP79621 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CiitaP79621 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
CiitaP79621 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CiitaP79621 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.69■□□□□ 0.26
CiitaP79621 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CiitaP79621 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.69■□□□□ 0.26
CiitaP79621 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.69■□□□□ 0.26
CiitaP79621 Gm2756-201ENSMUST00000195851 400 ntBASIC16.69■□□□□ 0.26
CiitaP79621 Gm2213-201ENSMUST00000197485 688 ntBASIC16.69■□□□□ 0.26
CiitaP79621 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CiitaP79621 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.69■□□□□ 0.26
CiitaP79621 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CiitaP79621 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CiitaP79621 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CiitaP79621 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CiitaP79621 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms