Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Pdlim4P70271 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Pdlim4P70271 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.87□□□□□ -0.35
Pdlim4P70271 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.87□□□□□ -0.35
Pdlim4P70271 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.87□□□□□ -0.35
Pdlim4P70271 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 Mir8098-201ENSMUST00000184011 137 ntBASIC12.87□□□□□ -0.35
Pdlim4P70271 Gm27741-201ENSMUST00000185060 237 ntBASIC12.87□□□□□ -0.35
Pdlim4P70271 Gm28659-201ENSMUST00000188013 759 ntBASIC12.87□□□□□ -0.35
Pdlim4P70271 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.87□□□□□ -0.35
Pdlim4P70271 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.87□□□□□ -0.35
Pdlim4P70271 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pdlim4P70271 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.86□□□□□ -0.35
Pdlim4P70271 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pdlim4P70271 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.86□□□□□ -0.35
Pdlim4P70271 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pdlim4P70271 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Gm8097-201ENSMUST00000117903 829 ntBASIC12.86□□□□□ -0.35
Pdlim4P70271 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.86□□□□□ -0.35
Pdlim4P70271 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.86□□□□□ -0.35
Pdlim4P70271 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Pdlim4P70271 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.86□□□□□ -0.35
Pdlim4P70271 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pdlim4P70271 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Pdlim4P70271 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Pdlim4P70271 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pdlim4P70271 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pdlim4P70271 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Pdlim4P70271 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Pdlim4P70271 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.85□□□□□ -0.35
Pdlim4P70271 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 Gm5864-201ENSMUST00000202263 970 ntBASIC12.85□□□□□ -0.35
Pdlim4P70271 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.85□□□□□ -0.35
Pdlim4P70271 Gm18622-201ENSMUST00000219361 595 ntBASIC12.85□□□□□ -0.35
Pdlim4P70271 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.85□□□□□ -0.35
Pdlim4P70271 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 Rps4l-201ENSMUST00000071745 943 ntBASIC12.85□□□□□ -0.35
Pdlim4P70271 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Pdlim4P70271 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pdlim4P70271 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms