Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm6P62313 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm6P62313 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm6P62313 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.56□□□□□ -0.24
Lsm6P62313 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Lsm6P62313 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm6P62313 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm6P62313 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm6P62313 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm6P62313 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Lsm6P62313 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm6P62313 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm6P62313 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm6P62313 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Lsm6P62313 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm6P62313 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm6P62313 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Lsm6P62313 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Lsm6P62313 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.55□□□□□ -0.24
Lsm6P62313 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Lsm6P62313 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Lsm6P62313 Gm28033-201ENSMUST00000184224 96 ntBASIC13.55□□□□□ -0.24
Lsm6P62313 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.55□□□□□ -0.24
Lsm6P62313 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Lsm6P62313 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Lsm6P62313 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Lsm6P62313 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.55□□□□□ -0.24
Lsm6P62313 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Lsm6P62313 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Lsm6P62313 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm6P62313 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm6P62313 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm6P62313 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Lsm6P62313 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.54□□□□□ -0.24
Lsm6P62313 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.54□□□□□ -0.24
Lsm6P62313 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.54□□□□□ -0.24
Lsm6P62313 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.54□□□□□ -0.24
Lsm6P62313 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.54□□□□□ -0.24
Lsm6P62313 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm6P62313 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm6P62313 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Lsm6P62313 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm6P62313 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm6P62313 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm6P62313 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.54□□□□□ -0.24
Lsm6P62313 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.54□□□□□ -0.24
Lsm6P62313 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.54□□□□□ -0.24
Lsm6P62313 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm6P62313 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm6P62313 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm6P62313 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm6P62313 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm6P62313 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.53□□□□□ -0.24
Lsm6P62313 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.53□□□□□ -0.24
Lsm6P62313 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lsm6P62313 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lsm6P62313 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lsm6P62313 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.53□□□□□ -0.24
Lsm6P62313 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.53□□□□□ -0.24
Lsm6P62313 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.53□□□□□ -0.24
Lsm6P62313 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.53□□□□□ -0.24
Lsm6P62313 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.53□□□□□ -0.24
Lsm6P62313 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm6P62313 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms