Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sec61a1P61620 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sec61a1P61620 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sec61a1P61620 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sec61a1P61620 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sec61a1P61620 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.64□□□□□ -0.23
Sec61a1P61620 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Sec61a1P61620 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.64□□□□□ -0.23
Sec61a1P61620 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Sec61a1P61620 Gm29707-201ENSMUST00000196325 491 ntBASIC13.64□□□□□ -0.23
Sec61a1P61620 Gm18669-201ENSMUST00000216049 778 ntBASIC13.64□□□□□ -0.23
Sec61a1P61620 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Sec61a1P61620 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sec61a1P61620 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sec61a1P61620 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Sec61a1P61620 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.63□□□□□ -0.23
Sec61a1P61620 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Sec61a1P61620 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sec61a1P61620 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.62□□□□□ -0.23
Sec61a1P61620 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.62□□□□□ -0.23
Sec61a1P61620 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sec61a1P61620 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.62□□□□□ -0.23
Sec61a1P61620 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.62□□□□□ -0.23
Sec61a1P61620 Gm27357-201ENSMUST00000183754 135 ntBASIC13.62□□□□□ -0.23
Sec61a1P61620 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sec61a1P61620 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Sec61a1P61620 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms