Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.59□□□□□ -0.07
Nup43P59235 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.59□□□□□ -0.07
Nup43P59235 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.59□□□□□ -0.07
Nup43P59235 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Nup43P59235 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nup43P59235 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.59□□□□□ -0.07
Nup43P59235 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup43P59235 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
Nup43P59235 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nup43P59235 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nup43P59235 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Nup43P59235 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nup43P59235 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nup43P59235 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Nup43P59235 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nup43P59235 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup43P59235 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.58□□□□□ -0.08
Nup43P59235 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.58□□□□□ -0.08
Nup43P59235 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nup43P59235 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.58□□□□□ -0.08
Nup43P59235 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.58□□□□□ -0.08
Nup43P59235 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.58□□□□□ -0.08
Nup43P59235 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.58□□□□□ -0.08
Nup43P59235 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup43P59235 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup43P59235 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup43P59235 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup43P59235 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Nup43P59235 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nup43P59235 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.58□□□□□ -0.08
Nup43P59235 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.58□□□□□ -0.08
Nup43P59235 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup43P59235 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup43P59235 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup43P59235 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup43P59235 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.58□□□□□ -0.08
Nup43P59235 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup43P59235 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup43P59235 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nup43P59235 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Mir5131-201ENSMUST00000175426 93 ntBASIC14.57□□□□□ -0.08
Nup43P59235 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
Nup43P59235 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
Nup43P59235 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.57□□□□□ -0.08
Nup43P59235 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.57□□□□□ -0.08
Nup43P59235 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nup43P59235 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nup43P59235 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nup43P59235 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup43P59235 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.57□□□□□ -0.08
Nup43P59235 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.56□□□□□ -0.08
Nup43P59235 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Nup43P59235 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.56□□□□□ -0.08
Nup43P59235 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms