Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cks2P56390 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cks2P56390 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.91□□□□□ -0.34
Cks2P56390 Mir770-201ENSMUST00000103252 94 ntBASIC12.91□□□□□ -0.34
Cks2P56390 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.91□□□□□ -0.34
Cks2P56390 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.91□□□□□ -0.34
Cks2P56390 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.91□□□□□ -0.34
Cks2P56390 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.91□□□□□ -0.34
Cks2P56390 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.91□□□□□ -0.34
Cks2P56390 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Gm7367-201ENSMUST00000057611 492 ntBASIC12.91□□□□□ -0.34
Cks2P56390 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cks2P56390 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cks2P56390 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.9□□□□□ -0.34
Cks2P56390 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cks2P56390 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.9□□□□□ -0.34
Cks2P56390 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cks2P56390 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cks2P56390 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.9□□□□□ -0.34
Cks2P56390 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cks2P56390 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cks2P56390 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.89□□□□□ -0.35
Cks2P56390 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Cks2P56390 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.89□□□□□ -0.35
Cks2P56390 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cks2P56390 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Cks2P56390 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.89□□□□□ -0.35
Cks2P56390 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Cks2P56390 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cks2P56390 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cks2P56390 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cks2P56390 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cks2P56390 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cks2P56390 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cks2P56390 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cks2P56390 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cks2P56390 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cks2P56390 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.88□□□□□ -0.35
Cks2P56390 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cks2P56390 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms