Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SqleP52019 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SqleP52019 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SqleP52019 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SqleP52019 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SqleP52019 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SqleP52019 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SqleP52019 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SqleP52019 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SqleP52019 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SqleP52019 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SqleP52019 Gm16026-204ENSMUST00000162652 683 ntBASIC16.71■□□□□ 0.27
SqleP52019 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SqleP52019 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SqleP52019 Gm44344-201ENSMUST00000200287 129 ntBASIC16.71■□□□□ 0.27
SqleP52019 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SqleP52019 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SqleP52019 Gm9899-201ENSMUST00000065519 555 ntBASIC16.71■□□□□ 0.27
SqleP52019 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.71■□□□□ 0.27
SqleP52019 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SqleP52019 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SqleP52019 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.71■□□□□ 0.27
SqleP52019 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SqleP52019 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
SqleP52019 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.7■□□□□ 0.26
SqleP52019 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SqleP52019 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SqleP52019 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.7■□□□□ 0.26
SqleP52019 Gm13015-201ENSMUST00000118674 204 ntBASIC16.7■□□□□ 0.26
SqleP52019 Gm15321-201ENSMUST00000121290 288 ntBASIC16.7■□□□□ 0.26
SqleP52019 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Gm10499-201ENSMUST00000174094 934 ntBASIC16.7■□□□□ 0.26
SqleP52019 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SqleP52019 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SqleP52019 Haglr-201ENSMUST00000100000 2085 ntBASIC16.69■□□□□ 0.26
SqleP52019 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SqleP52019 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SqleP52019 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SqleP52019 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SqleP52019 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SqleP52019 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SqleP52019 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SqleP52019 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SqleP52019 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SqleP52019 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SqleP52019 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SqleP52019 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.69■□□□□ 0.26
SqleP52019 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.69■□□□□ 0.26
SqleP52019 Mir1938-201ENSMUST00000158746 100 ntBASIC16.69■□□□□ 0.26
SqleP52019 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SqleP52019 Gm24694-201ENSMUST00000180054 110 ntBASIC16.69■□□□□ 0.26
SqleP52019 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SqleP52019 Gm27663-201ENSMUST00000184839 110 ntBASIC16.69■□□□□ 0.26
SqleP52019 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SqleP52019 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SqleP52019 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SqleP52019 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SqleP52019 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.69■□□□□ 0.26
SqleP52019 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SqleP52019 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SqleP52019 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SqleP52019 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.68■□□□□ 0.26
SqleP52019 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 Gm23984-201ENSMUST00000157139 203 ntBASIC16.68■□□□□ 0.26
SqleP52019 Mir7085-201ENSMUST00000184353 66 ntBASIC16.68■□□□□ 0.26
SqleP52019 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.68■□□□□ 0.26
SqleP52019 Gm44719-201ENSMUST00000206404 149 ntBASIC16.68■□□□□ 0.26
SqleP52019 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.68■□□□□ 0.26
SqleP52019 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.68■□□□□ 0.26
SqleP52019 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SqleP52019 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms