Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h1aP43275 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.79□□□□□ -0.36
Hist1h1aP43275 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Mir6982-201ENSMUST00000184354 68 ntBASIC12.79□□□□□ -0.36
Hist1h1aP43275 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.79□□□□□ -0.36
Hist1h1aP43275 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.79□□□□□ -0.36
Hist1h1aP43275 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hist1h1aP43275 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.78□□□□□ -0.36
Hist1h1aP43275 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Hist1h1aP43275 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.78□□□□□ -0.36
Hist1h1aP43275 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hist1h1aP43275 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Hist1h1aP43275 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hist1h1aP43275 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hist1h1aP43275 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.77□□□□□ -0.36
Hist1h1aP43275 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.77□□□□□ -0.36
Hist1h1aP43275 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hist1h1aP43275 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Hist1h1aP43275 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Hist1h1aP43275 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.77□□□□□ -0.37
Hist1h1aP43275 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hist1h1aP43275 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hist1h1aP43275 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms