Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.55□□□□□ -0.08
Sox6P40645 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Sox6P40645 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Sox6P40645 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sox6P40645 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Sox6P40645 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.54□□□□□ -0.08
Sox6P40645 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sox6P40645 Gm7367-201ENSMUST00000057611 492 ntBASIC14.54□□□□□ -0.08
Sox6P40645 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.54□□□□□ -0.08
Sox6P40645 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.54□□□□□ -0.08
Sox6P40645 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox6P40645 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sox6P40645 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox6P40645 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sox6P40645 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sox6P40645 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox6P40645 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox6P40645 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox6P40645 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox6P40645 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Sox6P40645 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox6P40645 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Sox6P40645 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox6P40645 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sox6P40645 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox6P40645 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox6P40645 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Sox6P40645 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox6P40645 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Sox6P40645 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Sox6P40645 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Sox6P40645 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Sox6P40645 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Sox6P40645 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox6P40645 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox6P40645 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sox6P40645 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Sox6P40645 Gm27742-201ENSMUST00000184667 60 ntBASIC14.52□□□□□ -0.09
Sox6P40645 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox6P40645 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Sox6P40645 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.52□□□□□ -0.09
Sox6P40645 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox6P40645 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox6P40645 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sox6P40645 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms