Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Sftpa1P35242 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.26□□□□□ -0.13
Sftpa1P35242 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sftpa1P35242 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.25□□□□□ -0.13
Sftpa1P35242 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Gm5866-201ENSMUST00000177881 973 ntBASIC14.25□□□□□ -0.13
Sftpa1P35242 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.25□□□□□ -0.13
Sftpa1P35242 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sftpa1P35242 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sftpa1P35242 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sftpa1P35242 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.24□□□□□ -0.13
Sftpa1P35242 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sftpa1P35242 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.24□□□□□ -0.13
Sftpa1P35242 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.24□□□□□ -0.13
Sftpa1P35242 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sftpa1P35242 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sftpa1P35242 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sftpa1P35242 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sftpa1P35242 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Sftpa1P35242 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sftpa1P35242 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.24□□□□□ -0.13
Sftpa1P35242 Haglr-201ENSMUST00000100000 2085 ntBASIC14.24□□□□□ -0.13
Sftpa1P35242 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.24□□□□□ -0.13
Sftpa1P35242 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sftpa1P35242 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sftpa1P35242 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sftpa1P35242 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Sftpa1P35242 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Sftpa1P35242 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.23□□□□□ -0.13
Sftpa1P35242 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.23□□□□□ -0.13
Sftpa1P35242 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sftpa1P35242 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.23□□□□□ -0.13
Sftpa1P35242 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.23□□□□□ -0.13
Sftpa1P35242 Gm2423-201ENSMUST00000074863 733 ntBASIC14.23□□□□□ -0.13
Sftpa1P35242 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.23□□□□□ -0.13
Sftpa1P35242 Gm10154-201ENSMUST00000084445 354 ntBASIC14.23□□□□□ -0.13
Sftpa1P35242 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sftpa1P35242 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Sftpa1P35242 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.23□□□□□ -0.13
Sftpa1P35242 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Sftpa1P35242 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sftpa1P35242 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sftpa1P35242 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sftpa1P35242 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.22□□□□□ -0.13
Sftpa1P35242 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.22□□□□□ -0.13
Sftpa1P35242 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.22□□□□□ -0.13
Sftpa1P35242 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.22□□□□□ -0.13
Sftpa1P35242 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.22□□□□□ -0.13
Sftpa1P35242 Gm27618-201ENSMUST00000183671 60 ntBASIC14.22□□□□□ -0.13
Sftpa1P35242 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.22□□□□□ -0.13
Sftpa1P35242 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.22□□□□□ -0.13
Sftpa1P35242 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.22□□□□□ -0.13
Sftpa1P35242 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms