Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.25□□□□□ -0.45
Rom1P32958 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rom1P32958 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rom1P32958 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rom1P32958 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Rom1P32958 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rom1P32958 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rom1P32958 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.24□□□□□ -0.45
Rom1P32958 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.24□□□□□ -0.45
Rom1P32958 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.24□□□□□ -0.45
Rom1P32958 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.24□□□□□ -0.45
Rom1P32958 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.24□□□□□ -0.45
Rom1P32958 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Gm7213-201ENSMUST00000215977 950 ntBASIC12.24□□□□□ -0.45
Rom1P32958 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.24□□□□□ -0.45
Rom1P32958 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rom1P32958 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rom1P32958 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rom1P32958 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rom1P32958 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Rom1P32958 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.23□□□□□ -0.45
Rom1P32958 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Rom1P32958 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rom1P32958 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rom1P32958 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rom1P32958 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Rom1P32958 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rom1P32958 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.23□□□□□ -0.45
Rom1P32958 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.23□□□□□ -0.45
Rom1P32958 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.23□□□□□ -0.45
Rom1P32958 Gm21814-202ENSMUST00000203277 873 ntBASIC12.23□□□□□ -0.45
Rom1P32958 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.23□□□□□ -0.45
Rom1P32958 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.23□□□□□ -0.45
Rom1P32958 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Gm7367-201ENSMUST00000057611 492 ntBASIC12.23□□□□□ -0.45
Rom1P32958 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rom1P32958 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.23□□□□□ -0.45
Rom1P32958 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.23□□□□□ -0.45
Rom1P32958 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rom1P32958 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.23□□□□□ -0.45
Rom1P32958 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Rom1P32958 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rom1P32958 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rom1P32958 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Rom1P32958 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rom1P32958 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms