Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Gm21362-201ENSMUST00000194272 928 ntBASIC14.41□□□□□ -0.1
Clk1P22518 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.41□□□□□ -0.1
Clk1P22518 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.41□□□□□ -0.1
Clk1P22518 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clk1P22518 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Clk1P22518 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Clk1P22518 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Gm15165-201ENSMUST00000118140 502 ntBASIC14.4□□□□□ -0.1
Clk1P22518 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.4□□□□□ -0.1
Clk1P22518 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Gm7367-201ENSMUST00000057611 492 ntBASIC14.4□□□□□ -0.1
Clk1P22518 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Clk1P22518 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Clk1P22518 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Clk1P22518 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.4□□□□□ -0.1
Clk1P22518 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.4□□□□□ -0.1
Clk1P22518 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clk1P22518 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Clk1P22518 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Clk1P22518 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.39□□□□□ -0.11
Clk1P22518 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Clk1P22518 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.39□□□□□ -0.11
Clk1P22518 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.39□□□□□ -0.11
Clk1P22518 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Clk1P22518 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Clk1P22518 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.39□□□□□ -0.11
Clk1P22518 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.39□□□□□ -0.11
Clk1P22518 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.39□□□□□ -0.11
Clk1P22518 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.39□□□□□ -0.11
Clk1P22518 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Clk1P22518 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Clk1P22518 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Clk1P22518 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clk1P22518 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.38□□□□□ -0.11
Clk1P22518 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk1P22518 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Clk1P22518 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clk1P22518 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms