Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.64□□□□□ -0.07
ApoeP08226 Mir5130-201ENSMUST00000175160 84 ntBASIC14.64□□□□□ -0.07
ApoeP08226 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ApoeP08226 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.64□□□□□ -0.07
ApoeP08226 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.64□□□□□ -0.07
ApoeP08226 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.64□□□□□ -0.07
ApoeP08226 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
ApoeP08226 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.64□□□□□ -0.07
ApoeP08226 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.64□□□□□ -0.07
ApoeP08226 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ApoeP08226 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ApoeP08226 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ApoeP08226 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
ApoeP08226 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.63□□□□□ -0.07
ApoeP08226 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
ApoeP08226 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ApoeP08226 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
ApoeP08226 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ApoeP08226 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.63□□□□□ -0.07
ApoeP08226 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
ApoeP08226 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Gm12134-201ENSMUST00000122109 520 ntBASIC14.63□□□□□ -0.07
ApoeP08226 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.63□□□□□ -0.07
ApoeP08226 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.63□□□□□ -0.07
ApoeP08226 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ApoeP08226 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ApoeP08226 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
ApoeP08226 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.62□□□□□ -0.07
ApoeP08226 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ApoeP08226 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.62□□□□□ -0.07
ApoeP08226 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.62□□□□□ -0.07
ApoeP08226 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.62□□□□□ -0.07
ApoeP08226 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
ApoeP08226 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ApoeP08226 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.61□□□□□ -0.07
ApoeP08226 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.61□□□□□ -0.07
ApoeP08226 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.61□□□□□ -0.07
ApoeP08226 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.61□□□□□ -0.07
ApoeP08226 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ApoeP08226 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.61□□□□□ -0.07
ApoeP08226 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ApoeP08226 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms