Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.86□□□□□ -0.19
Hdac3O88895 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.86□□□□□ -0.19
Hdac3O88895 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Hdac3O88895 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hdac3O88895 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Hdac3O88895 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hdac3O88895 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.85□□□□□ -0.19
Hdac3O88895 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.85□□□□□ -0.19
Hdac3O88895 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.85□□□□□ -0.19
Hdac3O88895 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Hdac3O88895 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.85□□□□□ -0.19
Hdac3O88895 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.85□□□□□ -0.19
Hdac3O88895 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.85□□□□□ -0.19
Hdac3O88895 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Hdac3O88895 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Hdac3O88895 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Hdac3O88895 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hdac3O88895 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hdac3O88895 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Hdac3O88895 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Hdac3O88895 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.84□□□□□ -0.19
Hdac3O88895 Gm14859-201ENSMUST00000117752 357 ntBASIC13.84□□□□□ -0.19
Hdac3O88895 Gm15372-201ENSMUST00000120729 834 ntBASIC13.84□□□□□ -0.19
Hdac3O88895 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.84□□□□□ -0.19
Hdac3O88895 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Gm27357-201ENSMUST00000183754 135 ntBASIC13.84□□□□□ -0.19
Hdac3O88895 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.84□□□□□ -0.19
Hdac3O88895 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.84□□□□□ -0.19
Hdac3O88895 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.84□□□□□ -0.19
Hdac3O88895 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Hdac3O88895 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hdac3O88895 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Hdac3O88895 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hdac3O88895 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hdac3O88895 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hdac3O88895 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hdac3O88895 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.83□□□□□ -0.19
Hdac3O88895 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hdac3O88895 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hdac3O88895 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Hdac3O88895 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hdac3O88895 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms