Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Apaf1O88879 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.06■□□□□ 0.8
Apaf1O88879 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Apaf1O88879 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Apaf1O88879 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Apaf1O88879 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
Apaf1O88879 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Apaf1O88879 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Apaf1O88879 Gm4995-201ENSMUST00000117247 432 ntBASIC20.06■□□□□ 0.8
Apaf1O88879 Gm14494-201ENSMUST00000118786 435 ntBASIC20.06■□□□□ 0.8
Apaf1O88879 Gm15467-201ENSMUST00000120582 445 ntBASIC20.06■□□□□ 0.8
Apaf1O88879 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.06■□□□□ 0.8
Apaf1O88879 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.06■□□□□ 0.8
Apaf1O88879 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Apaf1O88879 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Apaf1O88879 Gm10499-201ENSMUST00000174094 934 ntBASIC20.06■□□□□ 0.8
Apaf1O88879 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC20.06■□□□□ 0.8
Apaf1O88879 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Apaf1O88879 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Apaf1O88879 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Apaf1O88879 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Apaf1O88879 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Apaf1O88879 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Apaf1O88879 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Apaf1O88879 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Apaf1O88879 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Apaf1O88879 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Apaf1O88879 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Apaf1O88879 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Apaf1O88879 AC157650.3-201ENSMUST00000225058 1476 ntBASIC20.05■□□□□ 0.8
Apaf1O88879 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Apaf1O88879 Gm44616-201ENSMUST00000206417 1732 ntBASIC20.05■□□□□ 0.8
Apaf1O88879 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Apaf1O88879 Gm7901-201ENSMUST00000120430 1597 ntBASIC20.05■□□□□ 0.8
Apaf1O88879 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Apaf1O88879 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Apaf1O88879 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.05■□□□□ 0.8
Apaf1O88879 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.05■□□□□ 0.8
Apaf1O88879 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.05■□□□□ 0.8
Apaf1O88879 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Apaf1O88879 Gm8000-201ENSMUST00000188378 592 ntBASIC20.05■□□□□ 0.8
Apaf1O88879 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.05■□□□□ 0.8
Apaf1O88879 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Apaf1O88879 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Apaf1O88879 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Apaf1O88879 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Apaf1O88879 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Apaf1O88879 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Apaf1O88879 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Apaf1O88879 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Apaf1O88879 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Apaf1O88879 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Apaf1O88879 AC119177.1-201ENSMUST00000227647 1332 ntBASIC20.04■□□□□ 0.8
Apaf1O88879 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Apaf1O88879 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Apaf1O88879 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Apaf1O88879 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC20.04■□□□□ 0.8
Apaf1O88879 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Apaf1O88879 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.04■□□□□ 0.8
Apaf1O88879 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Apaf1O88879 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Apaf1O88879 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Apaf1O88879 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Apaf1O88879 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Apaf1O88879 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Apaf1O88879 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Apaf1O88879 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Apaf1O88879 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Apaf1O88879 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Apaf1O88879 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Apaf1O88879 Gm5366-201ENSMUST00000215494 1338 ntBASIC20.03■□□□□ 0.8
Apaf1O88879 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Apaf1O88879 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Apaf1O88879 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Apaf1O88879 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Apaf1O88879 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Apaf1O88879 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.03■□□□□ 0.8
Apaf1O88879 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.03■□□□□ 0.8
Apaf1O88879 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.03■□□□□ 0.8
Apaf1O88879 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Apaf1O88879 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Apaf1O88879 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Apaf1O88879 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Apaf1O88879 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Apaf1O88879 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Apaf1O88879 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Apaf1O88879 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Apaf1O88879 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Apaf1O88879 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Apaf1O88879 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Apaf1O88879 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Apaf1O88879 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC20.02■□□□□ 0.8
Apaf1O88879 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Apaf1O88879 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Apaf1O88879 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.02■□□□□ 0.8
Apaf1O88879 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC20.02■□□□□ 0.8
Apaf1O88879 Gm11594-201ENSMUST00000122313 162 ntBASIC20.02■□□□□ 0.8
Apaf1O88879 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Apaf1O88879 Gm17968-201ENSMUST00000194902 784 ntBASIC20.02■□□□□ 0.8
Apaf1O88879 Gm18246-201ENSMUST00000221023 728 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms