Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1bO88384 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1bO88384 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1bO88384 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1bO88384 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1bO88384 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1bO88384 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1bO88384 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1bO88384 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Vti1bO88384 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Vti1bO88384 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1bO88384 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vti1bO88384 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Vti1bO88384 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.76□□□□□ -0.05
Vti1bO88384 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.76□□□□□ -0.05
Vti1bO88384 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Vti1bO88384 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.76□□□□□ -0.05
Vti1bO88384 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.76□□□□□ -0.05
Vti1bO88384 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Vti1bO88384 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vti1bO88384 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Vti1bO88384 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Vti1bO88384 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.75□□□□□ -0.05
Vti1bO88384 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.75□□□□□ -0.05
Vti1bO88384 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.75□□□□□ -0.05
Vti1bO88384 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vti1bO88384 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.75□□□□□ -0.05
Vti1bO88384 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Vti1bO88384 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.74□□□□□ -0.05
Vti1bO88384 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.74□□□□□ -0.05
Vti1bO88384 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.74□□□□□ -0.05
Vti1bO88384 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.74□□□□□ -0.05
Vti1bO88384 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vti1bO88384 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1bO88384 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.73□□□□□ -0.05
Vti1bO88384 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1bO88384 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Vti1bO88384 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.73□□□□□ -0.05
Vti1bO88384 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1bO88384 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1bO88384 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1bO88384 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Vti1bO88384 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Vti1bO88384 Gm21362-201ENSMUST00000194272 928 ntBASIC14.73□□□□□ -0.05
Vti1bO88384 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms