Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Alx3O70137 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.1□□□□□ -0.15
Alx3O70137 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.1□□□□□ -0.15
Alx3O70137 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.1□□□□□ -0.15
Alx3O70137 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.1□□□□□ -0.15
Alx3O70137 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.1□□□□□ -0.15
Alx3O70137 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Alx3O70137 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx3O70137 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.09□□□□□ -0.15
Alx3O70137 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.09□□□□□ -0.15
Alx3O70137 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Alx3O70137 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.09□□□□□ -0.15
Alx3O70137 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Alx3O70137 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Gm15794-201ENSMUST00000120182 631 ntBASIC14.09□□□□□ -0.15
Alx3O70137 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Alx3O70137 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Alx3O70137 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.09□□□□□ -0.15
Alx3O70137 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.09□□□□□ -0.15
Alx3O70137 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Alx3O70137 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Alx3O70137 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.09□□□□□ -0.15
Alx3O70137 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.09□□□□□ -0.15
Alx3O70137 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Alx3O70137 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.09□□□□□ -0.15
Alx3O70137 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Alx3O70137 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx3O70137 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Alx3O70137 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Alx3O70137 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Alx3O70137 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Alx3O70137 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Alx3O70137 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.08□□□□□ -0.16
Alx3O70137 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.08□□□□□ -0.16
Alx3O70137 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Alx3O70137 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Alx3O70137 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Gm6659-201ENSMUST00000174752 547 ntBASIC14.08□□□□□ -0.16
Alx3O70137 Gm29518-201ENSMUST00000190858 372 ntBASIC14.08□□□□□ -0.16
Alx3O70137 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Alx3O70137 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.08□□□□□ -0.16
Alx3O70137 Gm44044-201ENSMUST00000205178 1089 ntBASIC14.08□□□□□ -0.16
Alx3O70137 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Alx3O70137 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.08□□□□□ -0.16
Alx3O70137 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx3O70137 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Alx3O70137 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms