Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Scamp3O35609 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scamp3O35609 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scamp3O35609 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scamp3O35609 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scamp3O35609 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.41■□□□□ 0.06
Scamp3O35609 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Scamp3O35609 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.41■□□□□ 0.06
Scamp3O35609 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.41■□□□□ 0.06
Scamp3O35609 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scamp3O35609 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scamp3O35609 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scamp3O35609 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scamp3O35609 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.41■□□□□ 0.06
Scamp3O35609 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scamp3O35609 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Scamp3O35609 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.41■□□□□ 0.06
Scamp3O35609 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scamp3O35609 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.41■□□□□ 0.06
Scamp3O35609 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scamp3O35609 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.41■□□□□ 0.06
Scamp3O35609 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scamp3O35609 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scamp3O35609 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Scamp3O35609 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.4■□□□□ 0.06
Scamp3O35609 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.4■□□□□ 0.06
Scamp3O35609 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
Scamp3O35609 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Scamp3O35609 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.4■□□□□ 0.06
Scamp3O35609 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scamp3O35609 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scamp3O35609 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scamp3O35609 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.39■□□□□ 0.05
Scamp3O35609 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Scamp3O35609 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scamp3O35609 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scamp3O35609 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.39■□□□□ 0.05
Scamp3O35609 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scamp3O35609 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.39■□□□□ 0.05
Scamp3O35609 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scamp3O35609 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scamp3O35609 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scamp3O35609 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scamp3O35609 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.39■□□□□ 0.05
Scamp3O35609 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.39■□□□□ 0.05
Scamp3O35609 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.39■□□□□ 0.05
Scamp3O35609 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scamp3O35609 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.39■□□□□ 0.05
Scamp3O35609 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scamp3O35609 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.39■□□□□ 0.05
Scamp3O35609 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Scamp3O35609 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Scamp3O35609 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.38■□□□□ 0.05
Scamp3O35609 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.38■□□□□ 0.05
Scamp3O35609 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.38■□□□□ 0.05
Scamp3O35609 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.38■□□□□ 0.05
Scamp3O35609 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
Scamp3O35609 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.38■□□□□ 0.05
Scamp3O35609 Gm5364-201ENSMUST00000216789 889 ntBASIC15.38■□□□□ 0.05
Scamp3O35609 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.38■□□□□ 0.05
Scamp3O35609 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Scamp3O35609 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scamp3O35609 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms