Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf3O08791 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf3O08791 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.05■□□□□ 0.16
Ebf3O08791 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ebf3O08791 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Ebf3O08791 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ebf3O08791 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.04■□□□□ 0.16
Ebf3O08791 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.04■□□□□ 0.16
Ebf3O08791 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
Ebf3O08791 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.04■□□□□ 0.16
Ebf3O08791 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.04■□□□□ 0.16
Ebf3O08791 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.04■□□□□ 0.16
Ebf3O08791 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.04■□□□□ 0.16
Ebf3O08791 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ebf3O08791 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ebf3O08791 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.03■□□□□ 0.16
Ebf3O08791 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Ebf3O08791 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ebf3O08791 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.03■□□□□ 0.16
Ebf3O08791 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.03■□□□□ 0.16
Ebf3O08791 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.03■□□□□ 0.16
Ebf3O08791 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.03■□□□□ 0.16
Ebf3O08791 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ebf3O08791 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Ebf3O08791 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.03■□□□□ 0.16
Ebf3O08791 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ebf3O08791 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ebf3O08791 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ebf3O08791 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ebf3O08791 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ebf3O08791 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ebf3O08791 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ebf3O08791 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ebf3O08791 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ebf3O08791 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ebf3O08791 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
Ebf3O08791 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ebf3O08791 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ebf3O08791 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ebf3O08791 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ebf3O08791 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ebf3O08791 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.02■□□□□ 0.16
Ebf3O08791 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ebf3O08791 Gm15358-201ENSMUST00000119249 520 ntBASIC16.02■□□□□ 0.16
Ebf3O08791 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.02■□□□□ 0.16
Ebf3O08791 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ebf3O08791 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ebf3O08791 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ebf3O08791 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.02■□□□□ 0.16
Ebf3O08791 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ebf3O08791 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf3O08791 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf3O08791 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.02■□□□□ 0.15
Ebf3O08791 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf3O08791 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf3O08791 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf3O08791 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf3O08791 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.02■□□□□ 0.15
Ebf3O08791 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ebf3O08791 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ebf3O08791 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms