Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Gm6257-201ENSMUST00000163864 910 ntBASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Mir5130-201ENSMUST00000175160 84 ntBASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Gm44430-201ENSMUST00000203376 995 ntBASIC14.12□□□□□ -0.15
Shisa8J3QNX5 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shisa8J3QNX5 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Gm13559-201ENSMUST00000120476 863 ntBASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Gm37055-201ENSMUST00000191866 133 ntBASIC14.11□□□□□ -0.15
Shisa8J3QNX5 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shisa8J3QNX5 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Mir6404-201ENSMUST00000183699 94 ntBASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Gm7367-201ENSMUST00000057611 492 ntBASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.1□□□□□ -0.15
Shisa8J3QNX5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.09□□□□□ -0.15
Shisa8J3QNX5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms