Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdh9F8VPK8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdh9F8VPK8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Gm19164-201ENSMUST00000210667 640 ntBASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdh9F8VPK8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh9F8VPK8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh9F8VPK8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh9F8VPK8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh9F8VPK8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdh9F8VPK8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdh9F8VPK8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms