Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Gm14494-201ENSMUST00000118786 435 ntBASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb9E9Q5G2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb9E9Q5G2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.14■□□□□ 0.5
Pcdhb9E9Q5G2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb9E9Q5G2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb9E9Q5G2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb9E9Q5G2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb9E9Q5G2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.13■□□□□ 0.49
Pcdhb9E9Q5G2 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.13■□□□□ 0.49
Pcdhb9E9Q5G2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb9E9Q5G2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb9E9Q5G2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb9E9Q5G2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcdhb9E9Q5G2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb9E9Q5G2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhb9E9Q5G2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb9E9Q5G2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb9E9Q5G2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb9E9Q5G2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb9E9Q5G2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb9E9Q5G2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms