Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Gm5320-201ENSMUST00000207163 1519 ntBASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Gm4875-201ENSMUST00000118257 786 ntBASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hfm1D3Z4R1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Gm6745-201ENSMUST00000199216 526 ntBASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Gm25857-201ENSMUST00000082788 129 ntBASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Hfm1D3Z4R1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hfm1D3Z4R1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Hfm1D3Z4R1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hfm1D3Z4R1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hfm1D3Z4R1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC21.42■■□□□ 1.02
Hfm1D3Z4R1 Gm4204-201ENSMUST00000110798 1231 ntBASIC21.42■■□□□ 1.02
Hfm1D3Z4R1 Gm14042-201ENSMUST00000120139 833 ntBASIC21.42■■□□□ 1.02
Hfm1D3Z4R1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC21.42■■□□□ 1.02
Hfm1D3Z4R1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC21.42■■□□□ 1.02
Hfm1D3Z4R1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC21.42■■□□□ 1.02
Hfm1D3Z4R1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hfm1D3Z4R1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC21.42■■□□□ 1.02
Hfm1D3Z4R1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Hfm1D3Z4R1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Hfm1D3Z4R1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hfm1D3Z4R1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Gm12138-201ENSMUST00000122180 951 ntBASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Ighv5-13-201ENSMUST00000193550 290 ntBASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hfm1D3Z4R1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.4■■□□□ 1.02
Hfm1D3Z4R1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hfm1D3Z4R1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hfm1D3Z4R1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Hfm1D3Z4R1 Gm23984-201ENSMUST00000157139 203 ntBASIC21.4■■□□□ 1.02
Hfm1D3Z4R1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC21.4■■□□□ 1.02
Hfm1D3Z4R1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hfm1D3Z4R1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Hfm1D3Z4R1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hfm1D3Z4R1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hfm1D3Z4R1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hfm1D3Z4R1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hfm1D3Z4R1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Hfm1D3Z4R1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hfm1D3Z4R1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Hfm1D3Z4R1 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Hfm1D3Z4R1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Hfm1D3Z4R1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
Hfm1D3Z4R1 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC21.39■■□□□ 1.02
Hfm1D3Z4R1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC21.39■■□□□ 1.02
Hfm1D3Z4R1 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC21.39■■□□□ 1.02
Hfm1D3Z4R1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC21.39■■□□□ 1.02
Hfm1D3Z4R1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hfm1D3Z4R1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hfm1D3Z4R1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hfm1D3Z4R1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hfm1D3Z4R1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hfm1D3Z4R1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hfm1D3Z4R1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hfm1D3Z4R1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hfm1D3Z4R1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms