Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.12■□□□□ 0.17
Scn1aA2APX8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.12■□□□□ 0.17
Scn1aA2APX8 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.12■□□□□ 0.17
Scn1aA2APX8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn1aA2APX8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.12■□□□□ 0.17
Scn1aA2APX8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.12■□□□□ 0.17
Scn1aA2APX8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn1aA2APX8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.12■□□□□ 0.17
Scn1aA2APX8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Gm23935-201ENSMUST00000102303 57 ntBASIC16.11■□□□□ 0.17
Scn1aA2APX8 Gm24270-201ENSMUST00000102326 57 ntBASIC16.11■□□□□ 0.17
Scn1aA2APX8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Gm24245-201ENSMUST00000157318 57 ntBASIC16.11■□□□□ 0.17
Scn1aA2APX8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn1aA2APX8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Chchd1-203ENSMUST00000224633 557 ntBASIC16.1■□□□□ 0.17
Scn1aA2APX8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn1aA2APX8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn1aA2APX8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn1aA2APX8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Scn1aA2APX8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.09■□□□□ 0.17
Scn1aA2APX8 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.09■□□□□ 0.17
Scn1aA2APX8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn1aA2APX8 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.09■□□□□ 0.17
Scn1aA2APX8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn1aA2APX8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Scn1aA2APX8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.09■□□□□ 0.17
Scn1aA2APX8 Gm10154-201ENSMUST00000084445 354 ntBASIC16.09■□□□□ 0.17
Scn1aA2APX8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Scn1aA2APX8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn1aA2APX8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn1aA2APX8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Scn1aA2APX8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn1aA2APX8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms