Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav12d-1A0N8R0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Gm14722-201ENSMUST00000118943 689 ntBASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav12d-1A0N8R0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav12d-1A0N8R0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12d-1A0N8R0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms