Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.42■□□□□ 0.06
Ccdc194A0A140LIT1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc194A0A140LIT1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc194A0A140LIT1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc194A0A140LIT1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc194A0A140LIT1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Mir3081-201ENSMUST00000175305 84 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm8825-201ENSMUST00000182565 998 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm4518-201ENSMUST00000182638 718 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm44454-201ENSMUST00000198541 138 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm9172-201ENSMUST00000212092 954 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc194A0A140LIT1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Gm7367-201ENSMUST00000057611 492 ntBASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc194A0A140LIT1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.38■□□□□ 0.05
Ccdc194A0A140LIT1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc194A0A140LIT1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ccdc194A0A140LIT1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc194A0A140LIT1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ccdc194A0A140LIT1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc194A0A140LIT1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc194A0A140LIT1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ccdc194A0A140LIT1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms