Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhgb8A0A140LI48 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm44729-201ENSMUST00000206759 2052 ntBASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhgb8A0A140LI48 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm7153-201ENSMUST00000117092 455 ntBASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Olfr129-201ENSMUST00000122318 993 ntBASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdhgb8A0A140LI48 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhgb8A0A140LI48 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms