Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-4A0A075B6B4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Gm15358-201ENSMUST00000119249 520 ntBASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Gm11452-201ENSMUST00000122376 690 ntBASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Gm5864-201ENSMUST00000202263 970 ntBASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Gm6296-201ENSMUST00000222599 943 ntBASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-4A0A075B6B4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-4A0A075B6B4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Trav6-4A0A075B6B4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-4A0A075B6B4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-4A0A075B6B4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Trav6-4A0A075B6B4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm13418-201ENSMUST00000119097 944 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm11780-201ENSMUST00000136880 516 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm44357-201ENSMUST00000195897 142 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm19658-201ENSMUST00000196231 138 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm44367-201ENSMUST00000196836 138 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm44350-201ENSMUST00000197197 138 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm44390-201ENSMUST00000197533 144 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm44313-201ENSMUST00000198018 138 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm44486-201ENSMUST00000198508 138 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm44314-201ENSMUST00000199263 138 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm44394-201ENSMUST00000199558 138 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm44484-201ENSMUST00000199873 138 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm44466-201ENSMUST00000200264 138 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm44359-201ENSMUST00000200671 138 ntBASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-4A0A075B6B4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms