Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3-4A0A075B654 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Gm27454-201ENSMUST00000185090 204 ntBASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav3-4A0A075B654 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Gm15375-201ENSMUST00000119510 849 ntBASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Gm37025-201ENSMUST00000195159 829 ntBASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Gm4974-201ENSMUST00000209974 875 ntBASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-4A0A075B654 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms