Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Trav5-1A0A075B5Z7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav5-1A0A075B5Z7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav5-1A0A075B5Z7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav5-1A0A075B5Z7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm27525-201ENSMUST00000184465 107 ntBASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Mir8117-201ENSMUST00000184773 107 ntBASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5-1A0A075B5Z7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm11779-201ENSMUST00000118541 368 ntBASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm5264-201ENSMUST00000190584 848 ntBASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5-1A0A075B5Z7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm27300-201ENSMUST00000184085 97 ntBASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm27335-201ENSMUST00000184758 97 ntBASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm2213-201ENSMUST00000197485 688 ntBASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav5-1A0A075B5Z7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Trav5-1A0A075B5Z7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms