Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Gm13474-201ENSMUST00000122466 815 ntBASIC12.08□□□□□ -0.48
CcsQ9WU84 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.08□□□□□ -0.48
CcsQ9WU84 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CcsQ9WU84 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.08□□□□□ -0.48
CcsQ9WU84 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CcsQ9WU84 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CcsQ9WU84 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CcsQ9WU84 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CcsQ9WU84 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.07□□□□□ -0.48
CcsQ9WU84 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CcsQ9WU84 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
CcsQ9WU84 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.07□□□□□ -0.48
CcsQ9WU84 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CcsQ9WU84 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 BC037039-201ENSMUST00000192003 2205 ntBASIC12.06□□□□□ -0.48
CcsQ9WU84 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
CcsQ9WU84 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Mir5130-201ENSMUST00000175160 84 ntBASIC12.06□□□□□ -0.48
CcsQ9WU84 Gm18032-201ENSMUST00000222541 538 ntBASIC12.06□□□□□ -0.48
CcsQ9WU84 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.06□□□□□ -0.48
CcsQ9WU84 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
CcsQ9WU84 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CcsQ9WU84 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcsQ9WU84 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CcsQ9WU84 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CcsQ9WU84 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CcsQ9WU84 Phf7-203ENSMUST00000226565 1971 ntBASIC12.05□□□□□ -0.48
CcsQ9WU84 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms