Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn11aQ9R053 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.19■□□□□ 0.5
Scn11aQ9R053 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn11aQ9R053 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn11aQ9R053 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn11aQ9R053 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn11aQ9R053 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn11aQ9R053 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn11aQ9R053 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.19■□□□□ 0.5
Scn11aQ9R053 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn11aQ9R053 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn11aQ9R053 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn11aQ9R053 Gm16026-204ENSMUST00000162652 683 ntBASIC18.19■□□□□ 0.5
Scn11aQ9R053 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.19■□□□□ 0.5
Scn11aQ9R053 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.19■□□□□ 0.5
Scn11aQ9R053 Gm10253-201ENSMUST00000194270 940 ntBASIC18.19■□□□□ 0.5
Scn11aQ9R053 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn11aQ9R053 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.19■□□□□ 0.5
Scn11aQ9R053 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.19■□□□□ 0.5
Scn11aQ9R053 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Scn11aQ9R053 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Scn11aQ9R053 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn11aQ9R053 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn11aQ9R053 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.18■□□□□ 0.5
Scn11aQ9R053 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn11aQ9R053 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.18■□□□□ 0.5
Scn11aQ9R053 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.18■□□□□ 0.5
Scn11aQ9R053 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC18.17■□□□□ 0.5
Scn11aQ9R053 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn11aQ9R053 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.17■□□□□ 0.5
Scn11aQ9R053 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.17■□□□□ 0.5
Scn11aQ9R053 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.17■□□□□ 0.5
Scn11aQ9R053 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.17■□□□□ 0.5
Scn11aQ9R053 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.17■□□□□ 0.5
Scn11aQ9R053 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn11aQ9R053 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn11aQ9R053 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn11aQ9R053 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn11aQ9R053 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Scn11aQ9R053 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn11aQ9R053 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn11aQ9R053 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn11aQ9R053 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.17■□□□□ 0.5
Scn11aQ9R053 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.17■□□□□ 0.5
Scn11aQ9R053 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn11aQ9R053 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.17■□□□□ 0.5
Scn11aQ9R053 Gm18057-201ENSMUST00000208220 503 ntBASIC18.17■□□□□ 0.5
Scn11aQ9R053 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn11aQ9R053 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Scn11aQ9R053 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn11aQ9R053 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn11aQ9R053 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Scn11aQ9R053 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn11aQ9R053 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn11aQ9R053 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.16■□□□□ 0.5
Scn11aQ9R053 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn11aQ9R053 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn11aQ9R053 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Scn11aQ9R053 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn11aQ9R053 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn11aQ9R053 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn11aQ9R053 Gm7774-201ENSMUST00000200064 533 ntBASIC18.16■□□□□ 0.5
Scn11aQ9R053 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn11aQ9R053 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Scn11aQ9R053 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.15■□□□□ 0.5
Scn11aQ9R053 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Scn11aQ9R053 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn11aQ9R053 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn11aQ9R053 Celf4-206ENSMUST00000224553 1729 ntBASIC18.15■□□□□ 0.5
Scn11aQ9R053 Gm13015-201ENSMUST00000118674 204 ntBASIC18.15■□□□□ 0.5
Scn11aQ9R053 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.15■□□□□ 0.5
Scn11aQ9R053 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.15■□□□□ 0.5
Scn11aQ9R053 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Scn11aQ9R053 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn11aQ9R053 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn11aQ9R053 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn11aQ9R053 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn11aQ9R053 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn11aQ9R053 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn11aQ9R053 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn11aQ9R053 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Scn11aQ9R053 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms