Protein–RNA interactions for Protein: Q9QYK7

Rnf11, RING finger protein 11, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf11Q9QYK7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf11Q9QYK7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf11Q9QYK7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf11Q9QYK7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Gm7284-201ENSMUST00000131667 944 ntBASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf11Q9QYK7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf11Q9QYK7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Gm33142-201ENSMUST00000193913 867 ntBASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf11Q9QYK7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf11Q9QYK7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf11Q9QYK7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf11Q9QYK7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf11Q9QYK7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf11Q9QYK7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms