Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Gm29518-201ENSMUST00000190858 372 ntBASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Gm45328-201ENSMUST00000210942 917 ntBASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 BC037039-201ENSMUST00000192003 2205 ntBASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccl28Q9JIL2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl28Q9JIL2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccl28Q9JIL2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccl28Q9JIL2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl28Q9JIL2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl28Q9JIL2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl28Q9JIL2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl28Q9JIL2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl28Q9JIL2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ccl28Q9JIL2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl28Q9JIL2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl28Q9JIL2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccl28Q9JIL2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl28Q9JIL2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms