Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Dap3Q9ER88 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Dap3Q9ER88 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Dap3Q9ER88 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Dap3Q9ER88 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Dap3Q9ER88 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.27□□□□□ -0.12
Dap3Q9ER88 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Dap3Q9ER88 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Dap3Q9ER88 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.27□□□□□ -0.13
Dap3Q9ER88 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Dap3Q9ER88 Gm45058-201ENSMUST00000205810 766 ntBASIC14.27□□□□□ -0.13
Dap3Q9ER88 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.27□□□□□ -0.13
Dap3Q9ER88 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Dap3Q9ER88 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.27□□□□□ -0.13
Dap3Q9ER88 Gm10566-201ENSMUST00000086739 996 ntBASIC14.27□□□□□ -0.13
Dap3Q9ER88 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Dap3Q9ER88 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Dap3Q9ER88 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Dap3Q9ER88 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Dap3Q9ER88 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Dap3Q9ER88 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Dap3Q9ER88 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Dap3Q9ER88 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.27□□□□□ -0.13
Dap3Q9ER88 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.27□□□□□ -0.13
Dap3Q9ER88 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Gm7889-201ENSMUST00000185591 958 ntBASIC14.26□□□□□ -0.13
Dap3Q9ER88 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.26□□□□□ -0.13
Dap3Q9ER88 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Dap3Q9ER88 Efs-202ENSMUST00000227037 2540 ntBASIC14.25□□□□□ -0.13
Dap3Q9ER88 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Gm36967-201ENSMUST00000193814 266 ntBASIC14.25□□□□□ -0.13
Dap3Q9ER88 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.25□□□□□ -0.13
Dap3Q9ER88 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.25□□□□□ -0.13
Dap3Q9ER88 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Dap3Q9ER88 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms