Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2aQ9DB34 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Gm11780-201ENSMUST00000136880 516 ntBASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2aQ9DB34 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Gm25990-201ENSMUST00000102440 86 ntBASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Gm7862-201ENSMUST00000121461 292 ntBASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Dancr-204ENSMUST00000132389 2347 ntBASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.16■□□□□ 0.18
Chmp2aQ9DB34 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.15■□□□□ 0.18
Chmp2aQ9DB34 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2aQ9DB34 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2aQ9DB34 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms