Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp4bQ9D8B3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp4bQ9D8B3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Chmp4bQ9D8B3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.49■□□□□ 0.71
Chmp4bQ9D8B3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.49■□□□□ 0.71
Chmp4bQ9D8B3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.49■□□□□ 0.71
Chmp4bQ9D8B3 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.49■□□□□ 0.71
Chmp4bQ9D8B3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Chmp4bQ9D8B3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp4bQ9D8B3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp4bQ9D8B3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp4bQ9D8B3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Chmp4bQ9D8B3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp4bQ9D8B3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Chmp4bQ9D8B3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Chmp4bQ9D8B3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Chmp4bQ9D8B3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp4bQ9D8B3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp4bQ9D8B3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp4bQ9D8B3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp4bQ9D8B3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp4bQ9D8B3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp4bQ9D8B3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp4bQ9D8B3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Chmp4bQ9D8B3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp4bQ9D8B3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp4bQ9D8B3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp4bQ9D8B3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp4bQ9D8B3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp4bQ9D8B3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Gm28033-201ENSMUST00000184224 96 ntBASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chmp4bQ9D8B3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chmp4bQ9D8B3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chmp4bQ9D8B3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms