Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hdhd3Q9CYW4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Efs-202ENSMUST00000227037 2540 ntBASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hdhd3Q9CYW4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hdhd3Q9CYW4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hdhd3Q9CYW4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms