Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Gm6443-201ENSMUST00000203599 874 ntBASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Gm6296-201ENSMUST00000222599 943 ntBASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sft2d3Q9CSV6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sft2d3Q9CSV6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm7862-201ENSMUST00000121461 292 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm44357-201ENSMUST00000195897 142 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm19658-201ENSMUST00000196231 138 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm44367-201ENSMUST00000196836 138 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm44350-201ENSMUST00000197197 138 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm44390-201ENSMUST00000197533 144 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm44313-201ENSMUST00000198018 138 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm44486-201ENSMUST00000198508 138 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm44314-201ENSMUST00000199263 138 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm44394-201ENSMUST00000199558 138 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm44484-201ENSMUST00000199873 138 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm44466-201ENSMUST00000200264 138 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm44359-201ENSMUST00000200671 138 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.18□□□□□ -0.3
Sft2d3Q9CSV6 Gm7506-201ENSMUST00000207758 815 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms