Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chchd1Q9CQA6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Chchd1Q9CQA6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Gm45417-201ENSMUST00000209533 758 ntBASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chchd1Q9CQA6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Gm4974-201ENSMUST00000209974 875 ntBASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Chchd1Q9CQA6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Actl10-202ENSMUST00000226583 1501 ntBASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Gm37025-201ENSMUST00000195159 829 ntBASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chchd1Q9CQA6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chchd1Q9CQA6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms