Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.38■□□□□ 0.05
Trim33Q99PP7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim33Q99PP7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm8825-201ENSMUST00000182565 998 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm4518-201ENSMUST00000182638 718 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.37■□□□□ 0.05
Trim33Q99PP7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim33Q99PP7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.36■□□□□ 0.05
Trim33Q99PP7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Trim33Q99PP7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.36■□□□□ 0.05
Trim33Q99PP7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trim33Q99PP7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim33Q99PP7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim33Q99PP7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.35■□□□□ 0.05
Trim33Q99PP7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim33Q99PP7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms