Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cstf3Q99LI7 Gm8784-201ENSMUST00000222096 1435 ntBASIC15□□□□□ -0.01
Cstf3Q99LI7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf3Q99LI7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cstf3Q99LI7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm8825-201ENSMUST00000182565 998 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm4518-201ENSMUST00000182638 718 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm7977-201ENSMUST00000193787 748 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cstf3Q99LI7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Gm33142-201ENSMUST00000193913 867 ntBASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Gm7367-201ENSMUST00000057611 492 ntBASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cstf3Q99LI7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf3Q99LI7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf3Q99LI7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf3Q99LI7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf3Q99LI7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cstf3Q99LI7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf3Q99LI7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.97□□□□□ -0.01
Cstf3Q99LI7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf3Q99LI7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf3Q99LI7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf3Q99LI7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf3Q99LI7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf3Q99LI7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cstf3Q99LI7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.97□□□□□ -0.01
Cstf3Q99LI7 Gm15165-201ENSMUST00000118140 502 ntBASIC14.97□□□□□ -0.01
Cstf3Q99LI7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms