Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lims1Q99JW4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Lims1Q99JW4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lims1Q99JW4 AA414768-201ENSMUST00000121924 1257 ntBASIC14.13□□□□□ -0.15
Lims1Q99JW4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lims1Q99JW4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.13□□□□□ -0.15
Lims1Q99JW4 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.13□□□□□ -0.15
Lims1Q99JW4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lims1Q99JW4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Lims1Q99JW4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lims1Q99JW4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lims1Q99JW4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lims1Q99JW4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lims1Q99JW4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lims1Q99JW4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lims1Q99JW4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lims1Q99JW4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lims1Q99JW4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lims1Q99JW4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lims1Q99JW4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lims1Q99JW4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.12□□□□□ -0.15
Lims1Q99JW4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Gm25016-201ENSMUST00000158399 131 ntBASIC14.12□□□□□ -0.15
Lims1Q99JW4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.12□□□□□ -0.15
Lims1Q99JW4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.12□□□□□ -0.15
Lims1Q99JW4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lims1Q99JW4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.12□□□□□ -0.15
Lims1Q99JW4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.12□□□□□ -0.15
Lims1Q99JW4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lims1Q99JW4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Gm27741-201ENSMUST00000185060 237 ntBASIC14.11□□□□□ -0.15
Lims1Q99JW4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lims1Q99JW4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lims1Q99JW4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lims1Q99JW4 Gm33142-201ENSMUST00000193913 867 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms